Cas no 873055-24-4 (5-(Trifluoromethyl)-1H-indol-6-amine)

5-(Trifluoromethyl)-1H-indol-6-amine is a fluorinated indole derivative with significant utility in pharmaceutical and agrochemical research. The trifluoromethyl group enhances metabolic stability and lipophilicity, making it valuable for drug discovery applications. Its amine functionality allows for further derivatization, enabling the synthesis of diverse bioactive compounds. This compound is particularly useful in the development of kinase inhibitors, receptor modulators, and other therapeutic agents targeting central nervous system disorders. The indole scaffold provides a versatile framework for structural optimization, while the electron-withdrawing trifluoromethyl group can influence binding affinity and selectivity. High-purity grades are available for research purposes, ensuring reliable performance in synthetic and biological studies.
5-(Trifluoromethyl)-1H-indol-6-amine structure
873055-24-4 structure
Product Name:5-(Trifluoromethyl)-1H-indol-6-amine
CAS No:873055-24-4
MF:C9H7F3N2
MW:200.160492181778
CID:1040825
PubChem ID:57470204
Update Time:2025-10-10

5-(Trifluoromethyl)-1H-indol-6-amine Chemical and Physical Properties

Names and Identifiers

    • 5-(Trifluoromethyl)-1H-indol-6-amine
    • DTXSID00726793
    • 873055-24-4
    • SCHEMBL395515
    • DB-332736
    • Inchi: 1S/C9H7F3N2/c10-9(11,12)6-3-5-1-2-14-8(5)4-7(6)13/h1-4,14H,13H2
    • InChI Key: QQZNJABYWKNVPQ-UHFFFAOYSA-N
    • SMILES: FC(C1C(=CC2=C(C=CN2)C=1)N)(F)F

Computed Properties

  • Exact Mass: 200.05613272g/mol
  • Monoisotopic Mass: 200.05613272g/mol
  • Isotope Atom Count: 0
  • Hydrogen Bond Donor Count: 2
  • Hydrogen Bond Acceptor Count: 2
  • Heavy Atom Count: 14
  • Rotatable Bond Count: 1
  • Complexity: 217
  • Covalently-Bonded Unit Count: 1
  • Defined Atom Stereocenter Count: 0
  • Undefined Atom Stereocenter Count : 0
  • Defined Bond Stereocenter Count: 0
  • Undefined Bond Stereocenter Count: 0
  • XLogP3: 2.3
  • Topological Polar Surface Area: 41.8?2

5-(Trifluoromethyl)-1H-indol-6-amine Pricemore >>

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Additional information on 5-(Trifluoromethyl)-1H-indol-6-amine

5-(Trifluoromethyl)-1H-indol-6-amine (CAS No: 873055-24-4): A Promising Scaffold in Medicinal Chemistry

The compound 5-(Trifluoromethyl)-1H-indol-6-amine (CAS No: 873055-24-4) has emerged as a critical molecule in contemporary medicinal chemistry research, particularly for its unique structural features and pharmacological potential. This indole derivative, characterized by a trifluoromethyl group at the 5-position and an amino substituent at the 6-position, exhibits intriguing properties that align with modern drug design principles such as lipophilicity balance and metabolic stability.

Recent studies highlight the trifluoromethyl substituent as a strategic modification in drug development, enhancing physicochemical properties like solubility and plasma protein binding. For instance, a 2023 publication in Journal of Medicinal Chemistry demonstrated that this group significantly improves the blood-brain barrier permeability of indole-based compounds, making them viable candidates for neurodegenerative disease therapies. The -NH? moiety at position 6, meanwhile, provides hydrogen-bonding capabilities crucial for receptor interactions.

Synthetic advancements have enabled scalable production of this compound through optimized routes involving palladium-catalyzed cross-coupling strategies. A notable protocol published in Nature Communications (2024) describes a one-pot synthesis utilizing microwave-assisted conditions, achieving >95% yield with minimal byproduct formation. This method reduces process steps compared to traditional multi-stage approaches, addressing sustainability concerns central to modern pharmaceutical manufacturing.

In biological evaluations, this compound has shown remarkable activity against cancer cell lines through dual mechanisms: inhibition of histone deacetylases (HDACs) and modulation of tumor necrosis factor-alpha (TNF-α) signaling pathways. Preclinical data from the University of Cambridge (2023) revealed IC?? values as low as 0.8 μM against triple-negative breast cancer cells without significant cytotoxicity to healthy fibroblasts, suggesting therapeutic selectivity.

Preliminary investigations into its neuroprotective effects are equally promising. A collaborative study between MIT and Pfizer researchers demonstrated neuroprotection in Parkinson's disease models via dopamine receptor subtype 2 (DRD2) agonism and α-synuclein aggregation inhibition. The trifluoromethyl group's electron-withdrawing effect was correlated with prolonged receptor occupancy time compared to unsubstituted analogs.

Structural modifications are actively explored to enhance specific properties while maintaining core activity profiles. A 2024 study published in Bioorganic & Medicinal Chemistry Letters introduced fluorine atom replacements on the indole ring that improved metabolic stability by resisting cytochrome P450-mediated oxidation without compromising kinase inhibitory activity.

In silico modeling using machine learning algorithms has identified novel targets for this scaffold within G-protein coupled receptor families, suggesting potential applications in inflammatory disorders beyond its current focus areas. Quantum mechanical studies further revealed conformational preferences that align with binding site geometries observed in crystallographic data from recent structural biology databases.

Clinical translation efforts are progressing through partnerships between academic institutions and biotech firms targeting oncology indications first-in-class therapies for refractory solid tumors. Phase I trials currently underway employ prodrug strategies to address bioavailability challenges while maintaining the core indole-trifluoromethyl pharmacophore identified through decades of structure-activity relationship studies.

This compound exemplifies how strategic structural modifications can transform simple indole scaffolds into multifunctional drug candidates capable of addressing complex pathophysiological mechanisms across therapeutic areas—from oncology to neurology—while adhering to modern ADMET optimization criteria essential for successful drug development programs.

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